CDS

Accession Number TCMCG057C30995
gbkey CDS
Protein Id XP_018439428.1
Location join(4109555..4109610,4109693..4109733,4109821..4109984,4110092..4110212,4110295..4110464,4110620..4111174)
Gene LOC108811827
GeneID 108811827
Organism Raphanus sativus

Protein

Length 368aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018583926.1
Definition PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category A
Description RNA recognition motif
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12741        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000578        [VIEW IN EMBL-EBI]
GO:0000902        [VIEW IN EMBL-EBI]
GO:0000904        [VIEW IN EMBL-EBI]
GO:0001667        [VIEW IN EMBL-EBI]
GO:0002064        [VIEW IN EMBL-EBI]
GO:0002065        [VIEW IN EMBL-EBI]
GO:0002066        [VIEW IN EMBL-EBI]
GO:0003002        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003697        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003730        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006403        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0006928        [VIEW IN EMBL-EBI]
GO:0006935        [VIEW IN EMBL-EBI]
GO:0007028        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007276        [VIEW IN EMBL-EBI]
GO:0007281        [VIEW IN EMBL-EBI]
GO:0007292        [VIEW IN EMBL-EBI]
GO:0007297        [VIEW IN EMBL-EBI]
GO:0007298        [VIEW IN EMBL-EBI]
GO:0007308        [VIEW IN EMBL-EBI]
GO:0007309        [VIEW IN EMBL-EBI]
GO:0007314        [VIEW IN EMBL-EBI]
GO:0007315        [VIEW IN EMBL-EBI]
GO:0007316        [VIEW IN EMBL-EBI]
GO:0007319        [VIEW IN EMBL-EBI]
GO:0007350        [VIEW IN EMBL-EBI]
GO:0007351        [VIEW IN EMBL-EBI]
GO:0007389        [VIEW IN EMBL-EBI]
GO:0007399        [VIEW IN EMBL-EBI]
GO:0007409        [VIEW IN EMBL-EBI]
GO:0007411        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008298        [VIEW IN EMBL-EBI]
GO:0008358        [VIEW IN EMBL-EBI]
GO:0008595        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009798        [VIEW IN EMBL-EBI]
GO:0009880        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009948        [VIEW IN EMBL-EBI]
GO:0009952        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0009994        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0010631        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016477        [VIEW IN EMBL-EBI]
GO:0017148        [VIEW IN EMBL-EBI]
GO:0019094        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019953        [VIEW IN EMBL-EBI]
GO:0021700        [VIEW IN EMBL-EBI]
GO:0022008        [VIEW IN EMBL-EBI]
GO:0022412        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030030        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0030182        [VIEW IN EMBL-EBI]
GO:0030707        [VIEW IN EMBL-EBI]
GO:0030855        [VIEW IN EMBL-EBI]
GO:0031175        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032269        [VIEW IN EMBL-EBI]
GO:0032270        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032504        [VIEW IN EMBL-EBI]
GO:0032989        [VIEW IN EMBL-EBI]
GO:0032990        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0034249        [VIEW IN EMBL-EBI]
GO:0034250        [VIEW IN EMBL-EBI]
GO:0035282        [VIEW IN EMBL-EBI]
GO:0035770        [VIEW IN EMBL-EBI]
GO:0036464        [VIEW IN EMBL-EBI]
GO:0040011        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042330        [VIEW IN EMBL-EBI]
GO:0043186        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043484        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044703        [VIEW IN EMBL-EBI]
GO:0045451        [VIEW IN EMBL-EBI]
GO:0045495        [VIEW IN EMBL-EBI]
GO:0045727        [VIEW IN EMBL-EBI]
GO:0046011        [VIEW IN EMBL-EBI]
GO:0048024        [VIEW IN EMBL-EBI]
GO:0048027        [VIEW IN EMBL-EBI]
GO:0048468        [VIEW IN EMBL-EBI]
GO:0048469        [VIEW IN EMBL-EBI]
GO:0048477        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048599        [VIEW IN EMBL-EBI]
GO:0048609        [VIEW IN EMBL-EBI]
GO:0048666        [VIEW IN EMBL-EBI]
GO:0048667        [VIEW IN EMBL-EBI]
GO:0048699        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048812        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048858        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0048870        [VIEW IN EMBL-EBI]
GO:0050684        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051247        [VIEW IN EMBL-EBI]
GO:0051248        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051674        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060293        [VIEW IN EMBL-EBI]
GO:0060429        [VIEW IN EMBL-EBI]
GO:0060810        [VIEW IN EMBL-EBI]
GO:0060811        [VIEW IN EMBL-EBI]
GO:0061564        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090130        [VIEW IN EMBL-EBI]
GO:0090132        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097485        [VIEW IN EMBL-EBI]
GO:0120036        [VIEW IN EMBL-EBI]
GO:0120039        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903311        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGGTCCAGATCTCGCAACGAAAACTTTCAATCCGGCGATGGCGCTAGCCCAGGGAAAATATTCATCGGAGGATTACACAAAGACACCACTAACACTGAGTTCAATAAGCACTTTGGAAAGTACGGAGAGATTACAGACTCGGTGATAATGAGGGATCGGCACACTGGGCTACCTAGAGGTTTCGGTTTCATCACCTTTGCTGATCCTTCTGTTGTCGATCAAGTCATCGAAGACACTCATACCTTCAATGGCAAACAGGTTGAGATCAAGAGGACGATTCCGAAAGGTGCTGGTAGTGGTGGTGGTGGTGGGAATCAGTCTAAGGATTTCAAGACTAAGAAGATTTTCGTTGGTGGTATACCCTCTTCTGTTACTGAAGATGAGCTTAAGGACTTTTTTGCCAAGTATGGGACCATAGTGGAGCACCAGATTATCCGAGACCATGAAACAAACAGGTCTCGAGGTTTCGGTTTTGTGATTTTCGACAGCGAGGAGGTTGTTGATGAGTTGTTGTCCAAAGGAAACATGGTCGACATGGCAGACACTCAGGTGGAGATCAAGAAAGCCGAACCAAAGAAATCTTCAAACCTACGTTCACCTCCTTCTTATGGTAGTCACCCTAGAGGCCGTTCTTCCTTTAACGATAGTTATGGTGGCAGTTACGGTGGACCTTACGGAGGTTTTGATGGAGGGTATGGTCCTCCTCCAGGTCCAATTAGGTCGCATGGAGGTCCTCCTAGTAGGTTTCCTGGGGGGTATGGGTATGGTCGTGGCGGCGTAGGCCCTGAGTTTGGAGGAGGGTATGGTGGCTATGGGGGTGCTAGTTTAGGTTACAGGAGTGAACCACCCCTTGGCTATTCTAGTCGTTTTGGACCCTATGGCAGCGGGTTTGGTGCTGAGGGTTATGGAGGCGGTGGTGGTGGTTATGGTGGTGGATATGGTCGTGGAGGAGGGGAAGGCTACGGGGGATATGGTGGTGGCCCAGGTTATGGTGGGGGATATGAATCAGGTGGCCCAGGTGGAAGTTATGAAGGAGCAGGTGCTCCTGGTCCATATGGCAGAGGTTATAGTAGCAGTAGTCGATACCATCCATATGCAAGATAG
Protein:  
MGSRSRNENFQSGDGASPGKIFIGGLHKDTTNTEFNKHFGKYGEITDSVIMRDRHTGLPRGFGFITFADPSVVDQVIEDTHTFNGKQVEIKRTIPKGAGSGGGGGNQSKDFKTKKIFVGGIPSSVTEDELKDFFAKYGTIVEHQIIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMVDMADTQVEIKKAEPKKSSNLRSPPSYGSHPRGRSSFNDSYGGSYGGPYGGFDGGYGPPPGPIRSHGGPPSRFPGGYGYGRGGVGPEFGGGYGGYGGASLGYRSEPPLGYSSRFGPYGSGFGAEGYGGGGGGYGGGYGRGGGEGYGGYGGGPGYGGGYESGGPGGSYEGAGAPGPYGRGYSSSSRYHPYAR